bigbio/quantms

Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

56 stars 46 forks 56 watchers Nextflow MIT License

lfq mass-spectrometry proteogenomics proteomics tmt

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1 Open Issue Need Help Last updated: Aug 25, 2025

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The memory limit option is not working. 10 months ago

help wanted

bigbio/quantms

Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

Nextflow

#lfq#mass-spectrometry#proteogenomics#proteomics#tmt